Characterization and genetic manipulation of thermophiles for ethnanol production

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Copyright: Fong, Nicholas Jiunn Chyang
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Abstract
In a search for potential ethanologens, waste compost was screened and 17 thermophilic bacterial strains were isolated. Two of these strains (M5EXG and M10EXGT) were further characterized due to their relatively high ethanol tolerance levels (5 and 10% v/v respectively) and Gram-negative nature. Both isolates were facultatively anaerobic, non-spore forming, non-motile, catalase-positive, oxidase-negative rods that were capable of utilizing a range of carbon sources including arabinose, galactose, mannose, glucose, and xylose and produced low amounts of ethanol, acetate and lactate. A chromosomal DNA fragment from M10EXGr, which contained adhT and other operon reading frames (ORFs) that have deduced peptide sequences similar to 3-hexulose-6-phosphate synthase (HPS), 6-phospho-3-hexuloisomerase (PHI) and an uncharacterized oxidoreductase, was sequenced. The adhT gene encoding the thermostable alcohol dehydrogenase (ADH-T) from M10EXGr, that demonstrated enzymatic activities with ethanol, 1-butanol, 1-pentanol, 1-heptanol, 1-hexanol, 1-octanol and 2-propanol but not methanol, was cloned and over-expressed in Escherichia coli. Nineteen putative thermophilic promoter fragments were isolated from M10EXGT with 6 of them showing elevated promoter activities. Nucleotide sequences of these 6 putative promoter fragments indicated that one of them (Pm117) contained a partial ORF that has deduced peptide sequence similar to a trigger factor protein in a number of Bacillus species. Furthermore, it also contained -10, -3 5 and SD regions upstream of the partial ORF. As such, we believe that promoter fragment Pm117 contains an authentic thermophilic promoter, probably expressing a trigger-factor-like protein in M10EXGt. Construction of the production-of-ethanol (pet) operon, containing adhT from M 1 OEXG T and pdc (encoding pyruvate decarboxylase) from Zymomonas mobilis was carried out. Promoterless pdc was sub-cloned downstream of the previously cloned adhT. Electroporation and conjugation experiments were also carried out in an effort to introduce the constructed pet operon into Ml OEXGT. However, despite several attempts, no transformants or transconjugants were obtained. Recombinant E. coli strains harboring the constructed pet operon produced enhanced levels of ethanol (0.5 g/1) and ethanologenic enzyme activities (0 .2 U ADH/mg protein and 0.02 U PDC/mg protein), although these levels were relatively low most likely due to weak activity of the native adhT promoter in E. coli.
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Author(s)
Fong, Nicholas Jiunn Chyang
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Rogers, Peter
Glenn, Dianne R.
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Publication Year
2004
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Thesis
Degree Type
PhD Doctorate
UNSW Faculty
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