Sensitivity analysis of the insulin signalling pathway for glucose transport

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Copyright: Gray, Catheryn
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Abstract
There has been a dramatic global increase in the incidence of type 2 diabetes. As type 2 diabetes results from dysregulation of the control mechanism of glucose homeostasis, it is not amenable to purely reductionist investigative methods. The methods of control theory and mathematical modelling, which are uniquely suited to obtaining system-wide insights, are increasingly being used to investigate complex biological questions such as the etiology of diabetes. The Sedaghat, Sherman and Quon model is a widely-cited mathematical model of insulin signalling published in 2002. The model captures many important signalling mechanisms and their interactions, however, it is also known to have some limitations. In this study, a local parametric sensitivity analysis (PSA) based on the time integral of GLUT4 expression at the plasma membrane (a measure related to glucose transport) was used to investigate the Sedaghat model. Sensitivity profiles for all rate constants and initial conditions over a range of insulin concentrations, input profiles and parameter perturbations are presented. The PSA revealed several important features of the model. There was an obvious saturation phenomenon at high insulin levels that affcted much of the network. The sensitivity of many parameters changed substantially across the insulin concentration range. These two features highlight the fact that results obtained under high insulin conditions, either in vivo or in silico, cannot necessarily be extrapolated to the physiological range. Furthermore, parameters from the model were classiffied as either sensitive (having a substantial influence on the model output) or insensitive (having little discernible effect). The major locations of regulation in the signalling network were determined by these means and flaws in the network identified. Potential improvements to the model were also highlighted by the PSA. In view of the model's limitations, and the biological knowledge gained over the past ten years, it is clear that the model as a whole is in need of major structural improvements. This work shows that we now have the analytical tools to attempt this task.
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Author(s)
Gray, Catheryn
Supervisor(s)
Coster, Adelle
Henry, Bruce
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Publication Year
2013
Resource Type
Thesis
Degree Type
Masters Thesis
UNSW Faculty
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