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spolTools: online utilities for analyzing spoligotypes of the Mycobacterium tuberculosis complex

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dc.contributor.author Tang, Chaka en_US
dc.contributor.author Reyes, Josephine F en_US
dc.contributor.author Luciani, Fabio en_US
dc.contributor.author Francis, Andrew R. en_US
dc.contributor.author Tanaka, Mark M en_US
dc.date.accessioned 2021-11-25T13:26:08Z
dc.date.available 2021-11-25T13:26:08Z
dc.date.issued 2008 en_US
dc.description.abstract spolTools is a collection of online programs designed to manipulate and analyze spoligotype datasets of the Mycobacterium tuberculosis complex. These tools are integrated into a repository currently containing 1179 spoligotypes and 6278 isolates across 30 datasets. Users can search this database to export for external use or to pass on to the integrated tools. These tools include the computation of basic population genetic quantities, the visualization of clusters of spoligotype patterns based on an estimated evolutionary history and a procedure to predict emerging strains – genotypes associated with elevated transmission. en_US
dc.identifier.uri http://hdl.handle.net/1959.4/39629
dc.language English
dc.language.iso EN en_US
dc.rights CC BY-NC-ND 3.0 en_US
dc.rights.uri https://creativecommons.org/licenses/by-nc-nd/3.0/au/ en_US
dc.source Legacy MARC en_US
dc.title spolTools: online utilities for analyzing spoligotypes of the Mycobacterium tuberculosis complex en_US
dc.type Journal Article en
dcterms.accessRights metadata only access
dspace.entity.type Publication en_US
unsw.accessRights.uri http://purl.org/coar/access_right/c_14cb
unsw.identifier.doiPublisher http://dx.doi.org/10.1093/bioinformatics/btn434 en_US
unsw.relation.faculty Science
unsw.relation.ispartofissue 20 en_US
unsw.relation.ispartofjournal Bioinformatics en_US
unsw.relation.ispartofpagefrompageto 2414-2415 en_US
unsw.relation.ispartofvolume 24 en_US
unsw.relation.originalPublicationAffiliation Tang, Chaka, Biotechnology & Biomolecular Sciences, Faculty of Science, UNSW en_US
unsw.relation.originalPublicationAffiliation Reyes, Josephine F, Biotechnology & Biomolecular Sciences, Faculty of Science, UNSW en_US
unsw.relation.originalPublicationAffiliation Luciani, Fabio, Biotechnology & Biomolecular Sciences, Faculty of Science, UNSW en_US
unsw.relation.originalPublicationAffiliation Francis, Andrew R. en_US
unsw.relation.originalPublicationAffiliation Tanaka, Mark M, Biotechnology & Biomolecular Sciences, Faculty of Science, UNSW en_US
unsw.relation.school School of Biotechnology & Biomolecular Sciences *
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